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SRX24095703: Whole genome sequencing of Clostridioides difficile from dog
1 ILLUMINA (NextSeq 2000) run: 927,523 spots, 276.3M bases, 93.5Mb downloads

Design: DNA was extracted from the C. difficile isolates using the Qiagen Dneasy Blood and tissue kit and the WGS library was prepared using the miniaturized Nextera XT-protocol
Submitted by: Leibniz Institute DSMZ
Study: Whole-genome sequencing and phylogenomic analyses of Clostridioides (Clostridium) difficile recovered from humans and animals in Makurdi, Nigeria
PRJNA1092862 • SRP498548 • All experiments • All runs
show Abstracthide Abstract
Whole-genome sequencing of 196 Clostridioides (Clostridium) difficile recovered from diarrheic human patients, and from cattle, dogs, pigs, poultry and poultry manure in the city of Makurdi, north-central Nigeria
Sample:
SAMN40642702 • SRS20884975 • All experiments • All runs
Organism: Clostridioides difficile
Library:
Name: CD-22-01581_D62
Instrument: NextSeq 2000
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 927,523 spots, 276.3M bases, 93.5Mb
Run# of Spots# of BasesSizePublished
SRR28493836927,523276.3M93.5Mb2024-07-30

ID:
32403984

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